Estimation of Recombinant Faction

= Nr
N

For testcross data we know the number of recombinant progeny directly. Let Nr equal the number of recombinant genotypes and N equal the total numbr of progeny.

F1 AaBb x aabb is the testcross.

Example:

We do a X2 for Ho:1:1:1:1 ratio and fail to accept Ho. Also we test Ho:1:1 ratio for A locus and B locus and fail to reject Ho. Next we test for Ho: independence between A and B loci. We fail to accept Ho for independence. Now let us estimate p.

  AaBb Aabb aaBb aabb Total
observed 140 38 32 150 360
expected 90 90 90 90 360

This is clearly coupling linkage, from the shortage of Aabb and aaBb classes.

=  70  = 0.194 or 19.4%
   360