Concepts

An Explanation of Chi-Squared Distributions

X2 Tests Part I

X2 Tests Part II

X2 Tests Part III

X2 Tests Part IV

Homogeneity X2
Part I

X2 Contingency Testing

Contingency X2

Homogeneity
X2 - A

Homogeneity X2
Part II

The Calculation
of X2

Homework Assignment #3 Questions

 

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Contingency X2

P(aaB_) = P(aa) P(B_) = 0.25(0.857) = 0.21425.
The expected number of aaB_ progeny is 0.21425(280) = 59.99.
P(aabb) = P(a) P(b) = 0.25(0.143) = 0.03575.
The expected number of aabb progeny is 0.03575(280) = 10.5

  B_ bb
A_ 180 (179.97) 30 (30.03)
aa 60 (59.99) 10 (10.01)

We can now test Ho:A and B are independent factors using a Contingency X2 test. We will use Yate’s correction, due to small numbers in some classes. If O-E is less than 0.5, then we set O-E = O.

X2 = S(| O-E| -1/2)2    
E    

= (|180 - 179.97| - 1/2)2 + (|30 - 30.03| - 1/2)2
179.97 30.03

+ (|60 - 59.99| - 1/2)2 + (|10 - 10.5| - 1/2)2
 59.99 10.5

    = 0.00 + 0.00 + 0.00 + 0 = 0.0

A contingency X2 test of 0.0 with1df is not significant. When α = 0.05 the critical X2 value must be 3.84 or larger. We could use the formula for a 2 x 2 contingency X2 test with Yate’s correction term.


X2 =    (ad-bc - 1/2N)2N       
(a+b)(a+c)(c+d)(b+d)    

  B_ bb  
A_ 180(a) 30(b) a+b
aa 60(C)
 a+c
10(d)
 b+d
c+d

X2 = [180(10) - 30(60) - 1/2(280)]2280    
(210)(240)(70)(40)    

= (1800-1800-140)2280    
141120000    

 =  5488000     
141120000    

    = 0.039 ~ 0

Which is a non-significant X2 when testing Ho:Factors A and B are independent. The explanation for the significant deviation from the 9:3:3:1 ratio is that there is a distorted segregation ratio at the B locus.

The rows show how the proportions vary for the B locus for the same level of the A factor. The columns show how the proportions vary for the A locus and a fixed level of factor B.

Copyright 2000©, Ted Helms

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